euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

68 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip648 chr1 49428729 49428729 - unknown germline validated no 66 AGBL4
srip2359 chr1 90914497 90914497 + unknown germline . no 66 .
srip3182 chr1 105028216 105028216 + unknown germline . no 66 .
srip4589 chr1 163772791 163772791 - unknown germline . no 66 .
srip5106 chr1 169524869 169524869 + unknown germline validated no 66 F5
srip6094 chr1 193778291 193778291 - unknown germline . no 66 .
srip7968 chr10 19216651 19216651 . unknown germline . no 66 .
srip11508 chr10 122662191 122662191 + unknown germline . no 66 WDR11
srip14610 chr11 48360716 48360716 - unknown germline validated no 66 .
srip16179 chr11 79630189 79630189 . unknown germline . no 66 .
srip17482 chr11 104040176 104040176 + unknown germline . no 66 .
srip18393 chr11 122300403 122300403 - unknown germline . no 66 .
srip19078 chr11 134305630 134305630 - unknown germline validated no 66 .
srip21097 chr12 33630064 33630064 - unknown germline . no 66 .
srip21895 chr12 40147174 40147174 . unknown germline . no 66 .
srip24365 chr12 84955192 84955192 - unknown germline . no 66 .
srip26036 chr12 118186926 118186926 + unknown germline . no 66 KSR2
srip26341 chr12 126802928 126802928 - unknown germline . no 66 .
srip28268 chr13 49957889 49957889 + unknown germline . no 66 CAB39L
srip28639 chr13 61221175 61221175 - unknown germline validated no 66 .
srip29742 chr13 64569837 64569837 . unknown germline . no 66 .
srip30583 chr13 78055082 78055082 + unknown germline validated no 66 .
srip39498 chr15 34031838 34031838 - unknown germline validated no 66 RYR3
srip39848 chr15 38339249 38339249 - unknown germline validated no 66 .
srip40192 chr15 47507328 47507328 - unknown germline validated no 66 SEMA6D
srip40948 chr15 53956103 53956103 . unknown germline validated no 66 WDR72
srip42482 chr15 83551623 83551623 - unknown germline validated no 66 HOMER2
srip46379 chr16 76393370 76393370 - unknown germline . no 66 CNTNAP4
srip55216 chr2 68049222 68049222 - unknown germline . no 66 .
srip55680 chr2 74087161 74087161 - unknown germline . no 66 STAMBP
srip59017 chr2 147020924 147020924 + unknown germline validated no 66 .
srip62113 chr2 221503749 221503749 . unknown germline validated no 66 .
srip62447 chr2 232482721 232482721 + unknown germline validated no 66 .
srip64472 chr20 29638569 29638569 . unknown germline validated no 66 .
srip71035 chr3 26524446 26524446 - unknown germline . no 66 .
srip73320 chr3 59852887 59852887 + unknown germline . no 66 FHIT
srip74831 chr3 82144851 82144851 - unknown germline . no 66 .
srip75800 chr3 86264938 86264938 . unknown germline . no 66 .
srip76118 chr3 98775487 98775487 - unknown germline . no 66 .
srip81733 chr3 188234417 188234417 . unknown germline validated no 66 LPP
srip83216 chr4 18194343 18194343 - unknown germline validated no 66 .
srip91118 chr4 126052289 126052289 - unknown germline . no 66 .
srip92628 chr4 138177324 138177324 + unknown germline validated no 66 .
srip95292 chr4 190659694 190659694 . unknown germline . no 66 .
srip96260 chr5 11391262 11391262 + unknown germline . no 66 CTNND2
srip97628 chr5 33633332 33633332 . unknown germline validated no 66 ADAMTS12
srip98281 chr5 40041333 40041333 - unknown germline . no 66 .
srip100518 chr5 89450768 89450768 + unknown germline validated no 66 .
srip104145 chr5 144330994 144330994 . unknown germline . no 66 .
srip104300 chr5 145009354 145009354 . unknown germline . no 66 .
srip108343 chr6 45852710 45852710 - unknown germline . no 66 .
srip108934 chr6 56729290 56729290 - unknown germline . no 66 LOC100652827
srip109440 chr6 63368195 63368195 + unknown germline validated no 66 .
srip110072 chr6 69198728 69198728 . unknown germline validated no 66 .
srip115036 chr6 157968609 157968609 . unknown germline validated no 66 ZDHHC14
srip115472 chr6 162181256 162181256 + unknown germline . no 66 PARK2
srip119915 chr7 84901725 84901725 - unknown germline validated no 66 .
srip121492 chr7 107829248 107829248 + unknown germline validated no 66 NRCAM
srip128810 chr8 109649034 109649034 + unknown germline . no 66 .
srip129724 chr8 123098838 123098838 + unknown germline . no 66 .
srip132097 chr9 29260360 29260360 + unknown germline . no 66 .
srip133496 chr9 32463896 32463896 - unknown germline validated no 66 DDX58
srip136311 chrX 11628364 11628364 - unknown germline . no 66 ARHGAP6
srip136565 chrX 14434992 14434992 + unknown germline . no 66 .
srip137638 chrX 57806439 57806439 - unknown germline . no 66 .
srip139751 chrX 98264288 98264288 . unknown germline . no 66 .
srip140291 chrX 111229553 111229553 - unknown germline . no 66 TRPC5
srip140439 chrX 111557749 111557749 - unknown germline validated no 66 ZCCHC16